Semi-quantitative gene expression studies of Mmiβ and Skip Involved in Endometrial Adenocarcinoma

Authors

  • Aabid Koul  Immunobiology Lab., Department of Biotechnology, University of Kashmir, Srinagar, J & K, India
  • Basit Amin  Hybridoma Lab., National Institute of Immunology, New Delhi, Delhi, India
  • Asif Amin  Immunobiology Lab., Department of Biotechnology, University of Kashmir, Srinagar, J & K, India
  • Zubair Wani  Immunobiology Lab., Department of Biotechnology, University of Kashmir, Srinagar, J & K, India
  • Umer Majeed  Immunobiology Lab., Department of Biotechnology, University of Kashmir, Srinagar, J & K, India
  • Raies Qadri  Immunobiology Lab., Department of Biotechnology, University of Kashmir, Srinagar, J & K, India

Keywords:

Mmiβ, Skip, gene expression, adenocarcinoma.

Abstract

Skip gene encodes a protein which plays a very vital role in a number of metabolic pathways. It is very significant in the glucose metabolism where it regulates the signalling of the insulin pathway. But the full molecular details of the pathways regulated by Skip encoded protein are not known. It is speculated that Skip gene expression is altered in case of endometrial adenocarcinoma (EAC). Mmiβ gene encodes for a protein called Myosin-1c which acts an actin-based molecular motor in the cells. It has been studied that this gene down-regulates during endometrial adenocarcinoma and colorectal cancers. In this study the expression analysis of these two was carried out using multiplex PCR. An endogenous control was used for this PCR. ACTB gene served as the endogenous control because of it being a house keeping gene. It thus shows a universal expression in all cells. Thus in this study the gene expression of Skip and Mmiβ genes was comparatively analyzed with ACTB gene. The results that came out of this study showed an over-expression of Skip gene and down-regulation of Mmiβ gene with respect to ACTB gene in cancer cell lines as was indicated by the previous studies with these genes. Expression of both genes i.e., Skip and Mmiβ was statistically compared between normal and cancerous cell lines and was found statistically significant at a value of P.<

References

  1. Ijuin T and Takenawa T. SKIP negatively regulate insulininduced GLUT4 translocation and membrane ruffle formation. Mol. Cell. Biol., 2003; 23: 1209-1220.
  2. Gurung R, Tan A, Ooms LM, McGrath MJ, Huysmans RD, Munday AD, Prescott M, Whisstock JC and Mitchell CA. Identification of a novel domain in two mammalian inositolpolyphosphate 5-phosphatases that mediates membrane ruffle localization: the inositol 5-phosphatase SKIP localizes to the endoplasmic reticulum and translocates to membrane ruffles following epidermal growth factor stimulation. J. Biol. Chem., 2003; 278: 11376-11385.
  3. Holt JR, Gillespie SKH, Provance DW, Shah K, Shokat KM, Corey DP, Mercer JA and Gillespie PG. A chemical-genetic strategy implicates myosin-1c in adaptation by hair cells. Cell, 2002; 108: 371-381.
  4. Bose A, Guilherme A, Robida SI, Nicoloro SMC, Zhou QL, Jiang ZY, Pomerleau DP and Czech MP. Glucose transporter recycling in response to insulin is facilitated by myosin Myo1c. Nature, 2002; 420: 821-824.
  5. Karakozova M, Kozak M, Wong CCL, Bailey AO, Yates JR Mogilner A, Zebroski H and Kashina A. Arginylation of beta-actin regulates actin cytoskeleton and cell motility. Science, 2006; 313: 192-196.
  6. Kusner DJ, Barton JA, Wen KK, Wang X, Rubenstein PA and Iyer SS. Regulation of phospholipase D activity by actin: actin exerts bidirectional modulation of mammalian phospolipase (sic) D activity in a polymerization-dependent, isoform-specific manner. J. Biol. Chem., 2002; 277: 50683- 50692.
  7. Romanowski T, Markiewicz A, Bednarz N and Bielawski KP. Housekeeping genes as a reference in quantitative realtime RT-PCR. Postepy. Hig. Med. Dosw., 2007; 61: 500-510.
  8. Mori R, Wang Q, Danenberg KD, Pinski JK and Danenberg PV. Both beta-actin and GAPDH are useful reference genes for normalization of quantitative RT-PCR in human FFPE tissue samples of prostate cancer. Prostate, 2008; 68: 1555- 1560.
  9. Roux KH. Optimization and troubleshooting in PCR. Genome Res., 1995; 4: 185-194.
  10. McPherson MJ, Hames BD and Taylor GR. PCR 2: A Pracrical Approach, 2001; Oxford University Press, pp 18-21.

Downloads

Published

2017-12-31

Issue

Section

Research Articles

How to Cite

[1]
Aabid Koul, Basit Amin, Asif Amin, Zubair Wani, Umer Majeed, Raies Qadri, " Semi-quantitative gene expression studies of Mmiβ and Skip Involved in Endometrial Adenocarcinoma, International Journal of Scientific Research in Science, Engineering and Technology(IJSRSET), Print ISSN : 2395-1990, Online ISSN : 2394-4099, Volume 3, Issue 8, pp.219-223, November-December-2017.